Parasites Lost
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Beginning with the basics

The group's findings were published in the March 15 issue of the Journal of Medicinal Chemistry. Collaborators included tropical disease experts Julio A. Urbina, of the Instituto Venezolano de Investigaciones Cientificas in Caracas, and Simon L. Croft, of the London School of Hygiene and Tropical Medicine, as well as additional scientists and students from the University of Illinois.

 Eric Oldfield, Silvia N.J. Moreno, and Roberto Docampo

But the work really began thirty years ago, with basic studies into the structure of proteins. These massive organic molecules contain thousands of atoms that may be configured into many complex forms, as if they were birds or flowers folded from similar sheets of paper.

 Eric Oldfield,
Silvia N.J. Moreno,
and Roberto Docampo.
University of Illinois.

Proton nuclear magnetic resonance (NMR) has already proven itself for the study of simple molecules, but Oldfield and colleagues have demonstrated that carbon-13 NMR could also be used to study proteins. They showed that experimental NMR spectra of amino acid residues in proteins are predictable with high accuracy by analyzing only small fragments of a protein. Then, using quantum chemistry calculations on the NCSA's SGI Origin2000 cluster, these researchers overturned conventional ideas of how carbon monoxide binds with hemoglobin.

Anti-osteoporosis drug Actonel Diagram showing anti-osteoporosis drug Actonel® (green), superimposed on the normal substrate (grey) in the active site of the target protein (blue).

 

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